Abstract

Journal of Biotechnology & Bioresearch

Rapid and Sensitive SARS-CoV-2 Detection in Saliva Samples; Basis for a High Throughput Screening

  • Open or CloseCarmen Almaraz1, Jose María Marimón2, Ane Sorarrain2, Olatz Arrizabalaga3, David Otaegui4 and Ana Gorostidi1*

    1Biodonostia Health Research Institute, Genomic Platform, Spain

    2Biodonostia Health Research Institute, Infectious Diseases Area, Group of Respiratory Infection and Antimicrobial Resistance, Osakidetza Basque Health Service, Donostia University Hospital, Microbiology Department, Spain

    3Biodonostia Health Research Institute, Group of Innovation, Spain

    4Biodonostia Health Research Institute, Neuroscience Area, Group of Multiple Sclerosis, Spain

    *Corresponding author: Ana Gorostidi, Biodonostia Health Research Institute, Genomic Platform, Spain

Submission: February 02, 2022; Published: March 16, 2022

Abstract

We used a commercially available colorimetric enzyme mix to perform Reverse Transcribed Loop- Mediated Isothermal Amplification (RT-LAMP) for detecting SARS-CoV-2 on saliva samples without a previous RNA purification step. We describe our optimization of the LAMP assay that enabled simple, fast and sensitive detection in any saliva sample. Adding Chelex-100 and SDS to saliva samples, we achieved 97% efficiency in the detection of SARS-Cov-2 with spike-in saliva samples and 100% in a small sample of saliva from infected patients. This method is meant to be the basis for high throughput screening, as well as a feasible and cheap method for any laboratory.

Keywords: Covid-19; SARS-CoV-2; RT-LAMP; Saliva; Direct RNA detection

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