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Abstract

Examines in Marine Biology & Oceanography

Metabolomic Profiling of Marine Microalgae using Silylation-Driven GC-Triple Quadrupole Mass Spectrometry

  • Open or CloseMurali Krishna Paidi1-3*, Kanchan Siddhaprasad Udata1,2 and Subir Kumar Mandal1,2*

    1Academy of Scientific and Innovative Research (AcSIR), India

    2CSIR-Central Salt and Marine Chemicals Research Institute, Council of Scientific and Industrial Research (CSIR), India

    3Center for Systems Biology and Molecular Medicine, Yenepoya (Deemed to be University), India

    *Corresponding author:Murali Krishna Paidi, Academy of Scientific and Innovative Research (AcSIR), Ghaziabad-201002, India; CSIR-Central Salt and Marine Chemicals Research Institute, Council of Scientific and Industrial Research (CSIR), GB Marg, Bhavnagar - 364 002, Gujarat, India; Center for Systems Biology and Molecular Medicine, Yenepoya (Deemed to be University), Deralakatte 575018, Mangalore, India Subir Kumar Mandal, Academy of Scientific and Innovative Research (AcSIR), Ghaziabad-201002, India; CSIR-Central Salt and Marine Chemicals Research Institute, Council of Scientific and Industrial Research (CSIR), GB Marg, Bhavnagar - 364 002, Gujarat, India

Submission: August 13, 2025;Published: October 28, 2025

DOI: 10.31031/EIMBO.2025.07.000673

ISSN : 2578-031X
Volume7 Issue5

Abstract

Marine microalgae, as primary producers, are a significant source of diverse bioactive compounds. To explore this, the endogenous small molecules (metabolites) of four species Chaetoceros curvisetus, Thalassiosira lundiana, Thalassiosira andamanica, and Graesiella emersonii were profiled using Gas Chromatography-Triple Quadrupole Mass Spectrometry (GC-TQMS). Crude aqueous and organic algal extracts were vacuum-dried and subjected to chemical derivatization using silylating agents such as N,O-Bis(trymethylsilyl)trifluroacetamide (BSTFA) and N-Methyl-N-trimethylsilytrifluoroacetamide (MSTFA) to improve GC-MS detection of polar compounds before molecular mass profiling. The results showed no significant difference in essential amino acid production (Isoleucine, Leucine, Phenylalanine, and Threonine) among G. emersonii, C. curvisetus, and T. lundiana (p<0.05, n=3). However, T. andamanica displayed greater concentrations of ergosterol, lactic acid, palmitic acid, and oleic acid, Conversely, T. lundiana showed elevated concentrations of the omega-3 PUFAs DHA and EPA. Whereas G. emersonii contained greater amounts of α-linolenic and stearic acids. This study highlights that the diatom Thalassiosira species are a major source of omega-3 PUFAs, underscoring their considerable value for nutraceutical and pharmaceutical applications.

Keywords:β-Carotene; Silylation; Fucoxanthin; Heatmap analysis; Metabolomics; Microalgae; Mass spectrometer

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